goleft - Collection of bioinformatics tools distributed under MIT license in a single static binary. Nucleus - Python and C++ code for reading and writing genomics data. Neher Lab - Pathogen evolution, genomics, and biophysics lab in Switzerland. BEDOPS - High-performance genomic feature operations. Open Targets - Partnership that uses human genetics and genomics data for systematic drug target identification and prioritisation. Varlociraptor - Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control. fgsea - Fast Gene Set Enrichment Analysis. Hail - Open-source, general-purpose, Python-based data analysis tool with additional data types and methods for working with genomic data. (References) gnomAD - Genome aggregation database. gplearn - Implements Genetic Programming in Python, with a scikit-learn inspired and compatible API. Cutevariant - Standalone and free application to explore genetics variations from VCF file. misha - Genomic data analysis suite. nf-core/eager - Bioinformatics best-practice analysis pipeline for NGS sequencing based ancient DNA (aDNA) data analysis. gfabase - Command-line utility for random-access storage of Graphical Fragment Assembly (GFA) data. GenomeSpy - Genome visualization tool with a grammar of graphics and WebGL-powered fluid interactions. (Code) GREIN - GEO RNA-seq Experiments Interactive Navigator. (Code) SCDE - R package for analyzing single-cell RNA-seq data.